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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7820895 chr8:11206262 T/C SGK223 chr8:8175258-8244008:- -0.38 -7.01 7.94E-12 Box Plot
THCA rs7821302 chr8:11236572 T/A SGK223 chr8:8175258-8244008:- 0.47 9.24 7.87E-19 Box Plot
THCA rs7821336 chr8:11793955 C/T SGK223 chr8:8175258-8244008:- -0.46 -8.54 1.81E-16 Box Plot
THCA rs7821459 chr8:11236681 T/G SGK223 chr8:8175258-8244008:- 0.47 9.24 7.87E-19 Box Plot
THCA rs7821826 chr8:10769439 C/T SGK223 chr8:8175258-8244008:- 0.34 6.76 3.98E-11 Box Plot
THCA rs7821914 chr8:10805015 A/G SGK223 chr8:8175258-8244008:- 0.37 7.29 1.33E-12 Box Plot
THCA rs7822109 chr8:11349147 T/C SGK223 chr8:8175258-8244008:- 0.38 6.81 2.99E-11 Box Plot
THCA rs78226320 chr2:132260336 G/GAA CCDC74B chr2:130896860-130902707:- 0.37 7.34 9.09E-13 Box Plot
THCA rs7822958 chr8:11422442 C/A SGK223 chr8:8175258-8244008:- 0.42 7.86 2.56E-14 Box Plot
THCA rs7823100 chr8:11422491 C/A SGK223 chr8:8175258-8244008:- 0.42 7.82 3.38E-14 Box Plot
THCA rs7823101 chr8:11422492 C/G SGK223 chr8:8175258-8244008:- 0.42 7.82 3.38E-14 Box Plot
THCA rs7823226 chr8:3242702 G/A CSMD1 chr8:2792875-4852494:- -0.42 -7.76 5.07E-14 Box Plot
THCA rs78232738 chr15:30996093 G/A CHRNA7 chr15:32215641-32465219:+ 0.3 7.07 5.39E-12 Box Plot
THCA rs7823296 chr8:10778546 A/G SGK223 chr8:8175258-8244008:- 0.34 6.66 7.56E-11 Box Plot
THCA rs7823349 chr8:10998630 G/T SGK223 chr8:8175258-8244008:- 0.41 7.36 8.08E-13 Box Plot